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. 1999 Oct;181(19):5967–5975. doi: 10.1128/jb.181.19.5967-5975.1999

TABLE 2.

Codon usage bias and G+C content of the S. enterica pduABCDEGHJKLMNOPQSTUVWX coding regions

ORF CAIa % G+C contentb % G+C content by positionc
1st 2nd 3rd
pduA 0.297 53 67 41 52
pduB 0.131 60 63 48 70
pduC 0.463 57 61 41 69
pduD 0.372 57 63 42 66
pduE 0.432 56 63 43 63
pduG 0.332 60 71 44 64
pduH 0.280 58 68 42 63
pduJ 0.421 56 69 44 57
pduK 0.309 56 64 48 58
pduL 0.290 60 70 42 69
pduM 0.367 62 73 41 71
pduN 0.213 62 68 50 68
pduO 0.344 62 66 49 69
pduP 0.386 59 59 46 71
pduQ 0.349 60 63 45 73
pduS 0.316 62 70 46 69
pduT 0.302 59 61 43 72
pduU 0.316 56 57 44 67
pduV 0.318 58 57 46 71
pduW 0.276 53 60 41 58
pduX 0.264 56 60 45 63
cob operon 56 63 44 61
Typical gene of S. enterica 0.2–0.8 54 58 44 58
a

The codon adaptation index (CAI) was determined as described previously (45). 

b

Percent G+C content of the indicated coding sequence. 

c

Percent G+C content of the first, second, or third codon position of the indicated coding sequence.