TABLE 2.
Comparison of amino acid identity among primate lentiviruses, demonstrating that SIVlhoest is distantly related to SIVmnda
Comparisons of SIVlhoest and major SIV lineages
|
||||||||
---|---|---|---|---|---|---|---|---|
Gag | Pol | Vif | Vpr | Tat | Rev | Env | Nef | |
SIVmnd | 54 | 67 | 38 | 65 | 43 | 32 | 51 | 44 |
SIVsyk | 48 | 51 | 31 | 21 | 31 | 19 | 35 | 40 |
SIVagm | 49 | 57 | 41 | 42 | 41 | 32 | 36 | 41 |
SIVsm | 49 | 58 | 30 | 42 | 35 | 30 | 35 | 43 |
SIVcpz | 49 | 58 | 33 | 41 | 26 | 19 | 30 | 41 |
Identities were calculated as described in the “Sequence comparisons” section of Materials and Methods.