TABLE 4.
Percent nucleotide and amino acid identity between VEEV subtype IC isolates analyzeda
| Isolate | P676-gb | V-198 | PMCHo5 | Panaquire | P676-ag | 6119 | 3908 |
|---|---|---|---|---|---|---|---|
| P676-gb | 99.76 (9) | 99.79 (8) | 99.84 (6) | 99.81 (7) | 99.81 (7) | 99.81 (7) | |
| V198 | 99.78 (25) | 99.95 (2) | 99.89 (4) | 99.92 (3) | 99.92 (3) | 99.92 (3) | |
| PMCHo5 | 99.84 (18) | 99.92 (9) | 99.95 (2) | 99.97 (1) | 99.97 (1) | 99.97 (1) | |
| Panaquire | 99.88 (14) | 99.91 (10) | 99.96 (5) | 99.97 (1) | 99.97 (1) | 99.97 (1) | |
| P676-ag | 99.86 (16) | 99.92 (9) | 99.96 (4) | 99.99 (1) | 100 (0) | 100 (0) | |
| 6119 | 99.82 (20) | 99.89 (13) | 99.93 (8) | 99.96 (5) | 99.96 (4) | 100 (0) | |
| 3908 | 99.82 (21) | 99.88 (14) | 99.93 (8) | 99.95 (6) | 99.96 (5) | 99.94 (7) |
a
Numbers above the diagonal represent percent amino acid identity, and numbers below the diagonal represent percent nucleotide identity. Numbers in parentheses represent the total nucleotide (of 11,391 nucleotides) or amino acid (of 3,750 amino acids) sequence differences in each pairwise comparison.