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American Journal of Human Genetics logoLink to American Journal of Human Genetics
. 1997 Aug;61(2):395–401. doi: 10.1086/514857

A submicroscopic deletion in Xq26 associated with familial situs ambiguus.

G B Ferrero 1, M Gebbia 1, G Pilia 1, D Witte 1, A Peier 1, R J Hopkin 1, W J Craigen 1, L G Shaffer 1, D Schlessinger 1, A Ballabio 1, B Casey 1
PMCID: PMC1715914  PMID: 9311745

Abstract

Abnormal left-right-axis formation results in heterotaxy, a multiple-malformation syndrome often characterized by severe heart defects, splenic abnormalities, and gastrointestinal malrotation. Previously we had studied a large family in which a gene for heterotaxy, HTX1, was mapped to a 19-cM region in Xq24-q27.1. Further analysis of this family has revealed two recombinations that place HTX1 between DXS300 and DXS1062, an interval spanning approximately 1.3 Mb in Xq26.2. In order to provide independent confirmation of HTX1 localization, a PCR-based search for submicroscopic deletions in this region was performed in unrelated males with sporadic or familial heterotaxy. A cluster of sequence-tagged sites failed to amplify in an individual who also had a deceased, affected brother. FISH identified the mother as a carrier of the deletion, which arose as a new mutation from the maternal grandfather. The deletion interval spans 600-1,100 kb and lies wholly within the 1.3-Mb region identified by recombination. Discovery of this deletion supports localization of HTX1 to Xq26.2 and reveals the first molecular-genetic abnormality associated with human left-right-asymmetry defects.

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Selected References

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  1. Adams M. D., Dubnick M., Kerlavage A. R., Moreno R., Kelley J. M., Utterback T. R., Nagle J. W., Fields C., Venter J. C. Sequence identification of 2,375 human brain genes. Nature. 1992 Feb 13;355(6361):632–634. doi: 10.1038/355632a0. [DOI] [PubMed] [Google Scholar]
  2. Alonso S., Pierpont M. E., Radtke W., Martinez J., Chen S. C., Grant J. W., Dähnert I., Taviaux S., Romey M. C., Demaille J. Heterotaxia syndrome and autosomal dominant inheritance. Am J Med Genet. 1995 Mar 13;56(1):12–15. doi: 10.1002/ajmg.1320560105. [DOI] [PubMed] [Google Scholar]
  3. Ang S. L., Rossant J. HNF-3 beta is essential for node and notochord formation in mouse development. Cell. 1994 Aug 26;78(4):561–574. doi: 10.1016/0092-8674(94)90522-3. [DOI] [PubMed] [Google Scholar]
  4. Britz-Cunningham S. H., Shah M. M., Zuppan C. W., Fletcher W. H. Mutations of the Connexin43 gap-junction gene in patients with heart malformations and defects of laterality. N Engl J Med. 1995 May 18;332(20):1323–1329. doi: 10.1056/NEJM199505183322002. [DOI] [PubMed] [Google Scholar]
  5. Casey B., Cuneo B. F., Vitali C., van Hecke H., Barrish J., Hicks J., Ballabio A., Hoo J. J. Autosomal dominant transmission of familial laterality defects. Am J Med Genet. 1996 Feb 2;61(4):325–328. doi: 10.1002/(SICI)1096-8628(19960202)61:4<325::AID-AJMG5>3.0.CO;2-T. [DOI] [PubMed] [Google Scholar]
  6. Casey B., Devoto M., Jones K. L., Ballabio A. Mapping a gene for familial situs abnormalities to human chromosome Xq24-q27.1. Nat Genet. 1993 Dec;5(4):403–407. doi: 10.1038/ng1293-403. [DOI] [PubMed] [Google Scholar]
  7. Chiang C., Litingtung Y., Lee E., Young K. E., Corden J. L., Westphal H., Beachy P. A. Cyclopia and defective axial patterning in mice lacking Sonic hedgehog gene function. Nature. 1996 Oct 3;383(6599):407–413. doi: 10.1038/383407a0. [DOI] [PubMed] [Google Scholar]
  8. Collignon J., Varlet I., Robertson E. J. Relationship between asymmetric nodal expression and the direction of embryonic turning. Nature. 1996 May 9;381(6578):155–158. doi: 10.1038/381155a0. [DOI] [PubMed] [Google Scholar]
  9. Ekker S. C., McGrew L. L., Lai C. J., Lee J. J., von Kessler D. P., Moon R. T., Beachy P. A. Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis. Development. 1995 Aug;121(8):2337–2347. doi: 10.1242/dev.121.8.2337. [DOI] [PubMed] [Google Scholar]
  10. Feijen A., Goumans M. J., van den Eijnden-van Raaij A. J. Expression of activin subunits, activin receptors and follistatin in postimplantation mouse embryos suggests specific developmental functions for different activins. Development. 1994 Dec;120(12):3621–3637. doi: 10.1242/dev.120.12.3621. [DOI] [PubMed] [Google Scholar]
  11. Freeman S. B., Muralidharan K., Pettay D., Blackston R. D., May K. M. Asplenia syndrome in a child with a balanced reciprocal translocation of chromosomes 11 and 20 [46,XX,t(11;20)(q13.1;q13.13)]. Am J Med Genet. 1996 Feb 2;61(4):340–344. doi: 10.1002/(SICI)1096-8628(19960202)61:4<340::AID-AJMG7>3.0.CO;2-Y. [DOI] [PubMed] [Google Scholar]
  12. Gebbia M., Towbin J. A., Casey B. Failure to detect connexin43 mutations in 38 cases of sporadic and familial heterotaxy. Circulation. 1996 Oct 15;94(8):1909–1912. doi: 10.1161/01.cir.94.8.1909. [DOI] [PubMed] [Google Scholar]
  13. Hemmati-Brivanlou A., Wright D. A., Melton D. A. Embryonic expression and functional analysis of a Xenopus activin receptor. Dev Dyn. 1992 May;194(1):1–11. doi: 10.1002/aja.1001940102. [DOI] [PubMed] [Google Scholar]
  14. Kondo M., Semba K., Shiokawa K., Yamamoto T. Molecular cloning of Xenopus activin type I receptor and the analysis of its expression during embryogenesis. Biochem Biophys Res Commun. 1996 Jan 17;218(2):549–555. doi: 10.1006/bbrc.1996.0098. [DOI] [PubMed] [Google Scholar]
  15. Levin M., Johnson R. L., Stern C. D., Kuehn M., Tabin C. A molecular pathway determining left-right asymmetry in chick embryogenesis. Cell. 1995 Sep 8;82(5):803–814. doi: 10.1016/0092-8674(95)90477-8. [DOI] [PubMed] [Google Scholar]
  16. Lowe L. A., Supp D. M., Sampath K., Yokoyama T., Wright C. V., Potter S. S., Overbeek P., Kuehn M. R. Conserved left-right asymmetry of nodal expression and alterations in murine situs inversus. Nature. 1996 May 9;381(6578):158–161. doi: 10.1038/381158a0. [DOI] [PubMed] [Google Scholar]
  17. Matzuk M. M., Kumar T. R., Bradley A. Different phenotypes for mice deficient in either activins or activin receptor type II. Nature. 1995 Mar 23;374(6520):356–360. doi: 10.1038/374356a0. [DOI] [PubMed] [Google Scholar]
  18. Meno C., Saijoh Y., Fujii H., Ikeda M., Yokoyama T., Yokoyama M., Toyoda Y., Hamada H. Left-right asymmetric expression of the TGF beta-family member lefty in mouse embryos. Nature. 1996 May 9;381(6578):151–155. doi: 10.1038/381151a0. [DOI] [PubMed] [Google Scholar]
  19. Mikkilä S. P., Janas M., Karikoski R., Tarkkila T., Simola K. O. X-linked laterality sequence in a family with carrier manifestations. Am J Med Genet. 1994 Feb 15;49(4):435–438. doi: 10.1002/ajmg.1320490417. [DOI] [PubMed] [Google Scholar]
  20. Penman Splitt M., Tsai M. Y., Burn J., Goodship J. A. Absence of mutations in the regulatory domain of the gap junction protein connexin 43 in patients with visceroatrial heterotaxy. Heart. 1997 Apr;77(4):369–370. doi: 10.1136/hrt.77.4.369. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Pilia G., MacMillan S., Nagaraja R., Mumm S., Weissenbach J., Schlessinger D. YAC/STS map of 9 Mb of Xq26 at 100-kb resolution, localizing 6 ESTs, 6 genes, and 32 genetic markers. Genomics. 1996 May 15;34(1):55–62. doi: 10.1006/geno.1996.0240. [DOI] [PubMed] [Google Scholar]
  22. Shaffer L. G., McCaskill C., Han J. Y., Choo K. H., Cutillo D. M., Donnenfeld A. E., Weiss L., Van Dyke D. L. Molecular characterization of de novo secondary trisomy 13. Am J Hum Genet. 1994 Nov;55(5):968–974. [PMC free article] [PubMed] [Google Scholar]
  23. Sixth International Workshop on Human X Chromosome Mapping 1995. Banff, Alberta, Canada, June 16-18, 1995. Report and abstracts. Cytogenet Cell Genet. 1995;71(4):307–342. doi: 10.1159/000134135. [DOI] [PubMed] [Google Scholar]
  24. Wapenaar M. C., Schiaffino M. V., Bassi M. T., Schaefer L., Chinault A. C., Zoghbi H. Y., Ballabio A. A YAC-based binning strategy facilitating the rapid assembly of cosmid contigs: 1.6 Mb of overlapping cosmids in Xp22. Hum Mol Genet. 1994 Jul;3(7):1155–1161. doi: 10.1093/hmg/3.7.1155. [DOI] [PubMed] [Google Scholar]
  25. Weinstein D. C., Ruiz i Altaba A., Chen W. S., Hoodless P., Prezioso V. R., Jessell T. M., Darnell J. E., Jr The winged-helix transcription factor HNF-3 beta is required for notochord development in the mouse embryo. Cell. 1994 Aug 26;78(4):575–588. doi: 10.1016/0092-8674(94)90523-1. [DOI] [PubMed] [Google Scholar]
  26. Winer-Muram H. T., Tonkin I. L. The spectrum of heterotaxic syndromes. Radiol Clin North Am. 1989 Nov;27(6):1147–1170. [PubMed] [Google Scholar]
  27. Zhou X., Sasaki H., Lowe L., Hogan B. L., Kuehn M. R. Nodal is a novel TGF-beta-like gene expressed in the mouse node during gastrulation. Nature. 1993 Feb 11;361(6412):543–547. doi: 10.1038/361543a0. [DOI] [PubMed] [Google Scholar]

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