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. 2003 Aug 1;100(17):10026–10031. doi: 10.1073/pnas.1631248100

Table 1. Differentially expressed genes by comparative microarray.

Virulence factors and cell wall remodeling
Higher expression in wild type
    Rv0016c pbpA, probable penicillin-binding membrane protein
    Rv0169, Rv0170, Rv0171, Rv0172, Rv0173, and Rv0174 mce1 operon, cell invasion
    Rv1162 narH, Nitrate reductase b chain
    Rv1164 narI, Nitrate reductase g chain
    Rv1181, Rv1182 pks4, papA3
    Rv1477 Putative invasion protein
    Rv1527c pks5
    Rv1916 aceAb, lc1 b module
    Rv1967 mce3B, mce3 operon, cell invasion
    Rv2151c ftsQ, ingrowth of wall at septum
    Rv2152c murC, peptidoglycan synthesis
    Rv2153c murG, peptidoglycan synthesis
    Rv2154c ftsW, membrane protein (shape determination)
    Rv2163c pbpB, probable penicillin-binding membrane protein
    Rv2244, Rv2245, and Rv2246 acpM, kasA, and kasB, fas II system
    Rv2524c fas
    Rv2583c relA, ppGpp synthetase I
    Rv3414c sigD
    Rv3494c, Rv3495c, Rv3496c, and Rv3497c mce4 operon, cell invasion
Higher expression in relA mutant
    Rv0440 groEL2, heat shock protein 65
    Rv0644c mmaA2, methoxymycolic acid synthase 2
    Rv0899 ompA, outer membrane protein
    Rv2416c eis
    Rv2947c pks15
    Rv3416 whiB3, transcriptional regulator
    Rv3418 groES, 10-kDa chaperone
Antigens and secreted proteins
Higher expression in wild type
    Rv0129c fbpC, mycolyltransferase 85C
    Rv0288 cfp7
    Rv0291 Secreted protease
    Rv0934 pstS1, major antigenic protein, PstS phosphate transport system
    Rv1368 lprF, lipoprotein
    Rv1884c rpfC
    Rv2031c hspX, 14-kDa antigen, heat shock protein Hsp20 family
    Rv2253 Probable secreted protein
    Rv3019c Similar to Esat6
    Rv3144c, Rv1646 PE/PPE family members
    Rv3763 lpqH, 19-kDa (major antigenic protein)
    Rv3875 esat6, early secretory antigen target
Higher expression in relA mutant
    Rv0203 Possible exported protein, has signal peptide
    Rv0867c Probable exported protein
    Rv0947c Probable mycolyl transferase
    Rv1288 Similarity to antigen 85B
    Rv1790, Rv2430c, Rv2487c, Rv3872, Rv2519, and Rv1172c PE/PPE/PE-PGRS family members
    Rv1886c fbpB, mycolyl transferase, antigen 85B
    Rv2290 lppO, lipoprotein
    Rv2301 cfp25, cutinase, secreted protein
    Rv2518c lppS, lipoprotein
    Rv2784c lppU, lipoprotein
    Rv2873 mpt83
    Rv3803c fbpD, mycolyl transferase, antigen 85C
    Rv3804c fbpA, mycolyl transferase, antigen 85A