Table I.
CM9-specific public clonotype TCRB CDR3 nucleotide alignments
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CDR3 codon usage of CM9-specific CD8+ T cell public clonotypes. Each section displays a distinct TCRB CDR3 amino acid sequence, and the nucleotide alignments for all corresponding clonotypes in each macaque. Public clonotypes were defined on the basis of TCRB amino acid sequences that were present in more than one macaque; previously reported TCRB sequences were included in this analysis (reference 17). 1–6: time points from PV for macaques r97113 and r96133 (1 is PV, and 2–6 are subsequent blood draws as shown in Fig. 3).