. 2009 Jun 10;83(17):8451–8462. doi: 10.1128/JVI.00685-09

TABLE 2.

Direct contacts between Fab Z13e1 and gp41 MPER peptide

gp41 MPER peptide residue and contact type^a	Fab Z13e1 residue or atom	Distance (Å)
van der Waals contacts
Trp^P670	Asn^H31, Tyr^H33, Ile^H97, Ile^H52
Asn^P671	Ile^H30, Asn^H31, Ile^H52, Tyr^H53, Gly^H54
Trp^P672	Ile^H52, Tyr^H53, Gly^H54
Phe^P673	Tyr^H33, Ile^H52
Asp^P674	Tyr^H33, His^H50, Ile^H52, Thr^H56, Lys^H58
Ile^P675	Tyr^H33, Ile^H97, Gly^H98, Val^H99, Tyr^H100E
Thr^P676	Leu^L92, His^H50, Lys^H58, Tyr^H100E, Tyr^H100G
Asn^P677	Lys^H58
Hydrogen bond contacts
Trp^P670-O	Tyr^H33-OH	2.63
Trp^P670-Nɛ1	Asn^H31-Oδ1	3.27
Asn^P671-Oδ1	Asn^H31-N	2.81
Asn^P671-Nδ2	Asn^H31-Oδ1	2.67
Asn^P671-O	Gly^H54-N	2.78
Asp^P674-Oδ2	His^H50-Nɛ2	2.82
Ile^P675-N	Tyr^H33-OH	2.94
Asn^P677-Oδ1	Lys^H58-Nζ	2.74

Hydrogen bonds and van der Waals contacts were identified with CONTACSYM (63).