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. 2009 Aug 19;18(22):4415–4427. doi: 10.1093/hmg/ddp397

Table 2.

Thirty-two candidate genes for mapping brain eQTL in peripheral blood

Probe ILMN_ Gene symbol Entrez Gene name Brain expressiona H2r P-value H2r Covariateb Relation to disease
1657857c TMEM14C Transmembrane protein 14C 7.32E−22 0.71 B
1764813c B3GALTL Beta 1,3-galactosyltransferase-like CV↓ 6.98E−14 0.78 SAB Peters-plus syndrome (MIM#261540)
1669878 GUSB Glucuronidase, beta 1.01E−13 0.64 B Mucopolysaccharidosis VII (MIM #253220)
1719316d TMED3 Transmembrane emp24 protein transport domain containing 3 2.35E−13 0.64 SB
1686626d BAT1 HLA-B associated transcript 1 CV↑ 4.11E−13 0.60 AB Asthma, myocardial infarctione
1812325 TMEM111 Transmembrane protein 111 CV↓ 9.48E−13 0.75 B
1800261d TUBA1B Tubulin, alpha 1b 8.23E−11 0.65 SAB
1718831 TMEM57 Transmembrane protein 57 CV↑ 1.19E−10 0.58 SAB
1768031c DEDD2 Death effector domain containing 2 CV↑OP ↓ 7.92E−09 0.56 SAB
1784602d CDKN1A Cyclin-dependent kinase inhibitor 1A 1.01E−08 0.47 B Cancere
1692026c SUV420H1 Suppressor of variegation 4-20 homolog 1 CV↑ 8.71E−08 0.43 None
1708516c PRTFDC1 Phosphoribosyl transferase domain containing 1 1.02E−07 0.44 SAB
1806937d C19orf62 Chromosome 19 open reading frame 62 1.92E−07 0.51 SAB
1679949 SLC25A23 Solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 Ch↑ 4.31E−07 0.43 SA
1686099 ZFYVE1 Zinc finger, FYVE domain containing 1 6.54E−07 0.43 B
1718706 ERAL1 Era G-protein-like 1 6.93E−07 0.47 B
1726456 SLC3A2 Solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2 CV↓ 9.37E−07 0.46 AB
1766657c STOM Stomatin CV↓ 9.41E−07 0.45 B
1761176 GRIPAP1 GRIP1 associated protein 1 5.65E−06 0.34 B
1775380d SMOX Spermine oxidase 2.97E−05 0.41 SB
1785060 TSPAN14 Tetraspanin 14 7.95E−05 0.41 SA
1764826c TFE3 Transcription factor binding to IGHM enhancer 3 1.81E−04 0.28 AB Renal carcinoma (MIM#605074)
1808875 RAB5A RAB5A, member RAS oncogene family CV↑Ch↓ 2.29E−04 0.35 B
1712312c RAB11A RAB11A, member RAS oncogene family H↑ 2.52E−04 0.34 AB
1779735c LOC389541 Chromosome 7 open reading frame 59 6.56E−04 0.31 SB
1739641c MTMR3 Myotubularin related protein 3 CV↓ 3.17E−03 0.28 B
1737074 LOC440589 Hypothetical LOC440589 CV↓ 1.24E−02 0.22 B
Ch↑
1662905 NME1-NME2 NME1–NME2 read-through transcript CV↓Ch↑ 2.28E−02 0.20 B Cancere
1716260 HSPA8 Heat shock 70 kDa protein 8 3.86E−02 0.16 SB Kidney failuree
1803846 EIF1 Eukaryotic translation initiation factor 1 7.51E−02 0.17 SB
1682299 NDUFA11 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11 9.05E−02 0.14 SAB
1695420 CLTA Clathrin, light chain (Lca) Ch↓ 3.68E−01 0.03 B

aGenes ↑up- or ↓down-regulated in a single-brain region compared with all other regions, CV, cerebellar vermis; Ch, head of caudate; OP, occipital pole; H, hippocampus.

bImportant covariates: A, age; S, sex; B, batch.

cProbe region uninterrupted by SNPs in vervet.

dProbe region containing SNPs in vervet.

eGenetic Association Database (GAD).