TABLE 1.
miRNAs enriched in RPE, retina, and choroid by combining 16 and 20 WG samples
Name | RPE vs. choroid |
RPE vs. retina |
||
---|---|---|---|---|
Fold | P | Fold | P | |
miR-184a | 11 | 3E−02 | 29 | 8−03 |
miR-187a | 455 | 5E−08 | 488 | 7E−08 |
miR-200aa | 79 | 3E−08 | 18 | 2E−05 |
miR-204a | 691 | 2E−06 | 42 | 3E−07 |
miR-211a | 75 | 1E−08 | 388 | 4E−06 |
miR-222a | 11 | 1E−05 | 23 | 2E−05 |
miR-221 | 13 | 1E−05 | 17 | 3E−05 |
miR-200b | 72 | 3E−06 | 16 | 6E−05 |
Retina vs. RPE | Retina vs. choroid | |||
miR-124a | 57 | 8E−05 | 302 | 1E−04 |
miR-124ba | 22 | 9E−06 | 147 | 6E−05 |
miR-135ba | 32 | 7E−05 | 115 | 2E−06 |
miR-182a | 57 | 2E−03 | 705 | 1E−03 |
miR-183a | 27 | 2E−05 | 199 | 4E−06 |
miR-96a | 42 | 1E−06 | 257 | 5E−04 |
Choroid vs. RPE | Choroid vs. retina | |||
miR-126a | 18 | 5E−06 | 187 | 1E−09 |
miR-139 | 21 | 3E−04 | 12 | 5E−06 |
miR-142–3pa | 25 | 2E−05 | 48 | 2E−07 |
miR-145 | 14 | 3E−04 | 258 | 3E−05 |
miR-146aa | 48 | 1E−07 | 119 | 1E−07 |
miR-150a | 12 | 3E−05 | 35 | 1E−06 |
miR-155 | 18 | 5E−04 | 53 | 3E−03 |
miR-199a | 17 | 6E−06 | 21 | 4E−02 |
miR-199a*a | 24 | 1E−06 | 538 | 4E−10 |
miR-199ba | 17 | 4E−06 | 138 | 4E−09 |
miR-199-sa | 28 | 8E−08 | 627 | 8E−08 |
miR-214a | 17 | 8E−06 | 909 | 4E−09 |
Samples (n=6) were pooled for each tissue between two age groups (16 and 20 WG, n=3/group) before statistical analysis. Criteria for enrichment: P < 0.05 and >10-fold higher expression than the other two tissues.
Same as miRNAs identified by comparing 16 and 20 WG separately.