Table 1.
Proven and inferred mutations in NCCT, NKCC2 and ROMK in FHS.
Variant | Phylogenetic conservation of wild type residue | Allele frequency in FHS unrelateds | Allele frequency in European Caucasian disease patients | Biochemical loss of function 18-22 | SIFT/Polyphen |
---|---|---|---|---|---|
NCCT | |||||
E112X* | disruptive | 0.00025 | 0.0039 | yes | NA |
L155F | complete | 0.00025 | 0 | − | ++/+ |
S188F | complete | 0.00025 | 0 | − | ++/++ |
A232T | complete | 0.00050 | 0 | − | ++/+ |
R261C* | complete | 0.00050 | 0 | − | ++/++ |
R399L* | vertebrate | 0.00025 | 0.0078 | yes | ++/++ |
G439S* | complete | 0.00050 | 0.0391 | yes | ++/++ |
F495L | complete | 0.00025 | 0 | − | ++/++ |
P560H* | complete | 0.00025 | 0 | − | ++/++ |
G613S* | complete | 0.00025 | 0.0039 | yes | ++/++ |
G741R* | complete | 0.00050 | 0.1211 | yes | ++/++ |
G779E | complete | 0.00025 | 0 | − | ++/++ |
R861C* | vertebrate | 0.00025 | 0.0195 | − | ++/+ |
R964Q* | vertebrate | 0.00025 | 0.0117 | yes | ++/++ |
G989R* | vertebrate | 0.00025 | 0.0156 | yes | −/+ |
NKCC2 | |||||
T235M | complete | 0.00025 | 0 | − | ++/++ |
P254A | complete | 0.00025 | 0 | − | ++/++ |
R302-FS* | disruptive | 0.00025 | 0.0069 | yes | NA |
R302W | complete | 0.00025 | 0 | − | ++/++ |
P348L | complete | 0.00025 | 0 | − | ++/++ |
N399S | vcomplete | 0.00050 | 0 | − | ++/++ |
L505V | complete | 0.00025 | 0 | − | ++/+ |
P569H | complete | 0.00025 | 0 | − | ++/++ |
Y1070C | complete | 0.00025 | 0 | − | ++/++ |
P1083A | complete | 0.00025 | 0 | − | ++/++ |
ROMK | |||||
P166S | complete | 0.00025 | 0 | − | ++/+ |
R169H | complete | 0.00025 | 0 | − | ++/++ |
R193P | complete | 0.00025 | 0 | − | ++/++ |
H251Y | complete | 0.00050 | 0 | yes | ++/++ |
T313-FS* | disruptive | 0.00025 | 0.0104 | yes | NA |
++: probably damaging (PolyPhen) or deleterious (SIFT); +: possibly damaging or deleterious/low confidence; −: benign or tolerated.
Previously reported as disease-causing.