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. Author manuscript; available in PMC: 2014 Jan 12.
Published in final edited form as: Nat Clin Pract Gastroenterol Hepatol. 2008 Jun 24;5(8):456–468. doi: 10.1038/ncpgasthep1179

Table 1.

Genetic, biochemical and clinical features of bile acid synthesis defects.

Enzyme defect Gene encoding the affected enzyme (reference) Urine bile acid profile serum bile acid profile Clinical features
Oxysterol 7α-hydroxylase deficiency CYP7B14 ↑ Sulfate and glycosulfate conjugates of 3β-δ5-monohydroxy bile acids Absence of primary bile acids Extremely high levels of bile acids, primarily 3β-δ5-monohydroxy bile acids Neonatal hepatitis (single reported case; unrecognized cases could be due to prenatal or early-postnatal death)
Δ4-3-oxosteroid-5β-reductase deficiency AKR1D1(SRD5B1)20 ↑ 3-oxo-δ4 bile acids
↑ Allo bile acids
↓ Primary bile acids
↑ 3-oxo-δ4 bile acids
↑ Allo bile acids
↓ Primary bile acids
Neonatal hepatitis with rapid progression to liver failure
Neonatal hemochromatosis
3β-hydroxy-Δ5-C27-steroid dehydrogenase deficiency HSD3B738,39 ↑ Dihydroxy & trihydroxy cholenoic acids
↓ Primary bile acids
↓ or absence of primary bile acids Neonatal hepatitis
Late-onset liver disease
Malabsorption
Cerebrotendinous xanthomatosis (sterol 27-hydroxylase deficiency) CYP27A148 ↑ Plasma cholestanol: cholesterol ratio ↑ Bile alcohol glucuronides Progressive neurologic dysfunction in 2nd–3rd decade of life
Chronic diarrhea
Bilateral juvenile cataracts
Neonatal cholestasis
Alpha methylacyl-CoA racemase deficiency AMACR gene on chromosome 5p13.2-q11.171 ↑ C27 trihydroxycholestanoic and pristanic acid
↓ Primary bile acids
↑ C27 trihydroxycholestanoic and pristanic acid
↓ Primary bile acids
Normal long-chain fatty acids and phytanic acid
Adult onset peripheral neuropathy
Neonatal cholestasis with considerable fat-soluble-vitamin deficiency
Zellweger syndrome (cerebrohepatorenal syndrome) 12 PEX gene mutations;
PEX1 mutations are the most common.
Atypical monohydroxy, dihydroxy and trihydroxy C27 bile acids
↓ Primary bile acids
↑ Long-chain fatty acids
↑ Cholestanoic and pipecolic acid
↑ C29 dicarboxylic acid
↓ Primary bile acids
Craniofacial abnormalities
Neuronal migration defects
Polycystic kidneys
Chronic liver disease
Bony abnormalities
Bile acid conjugation defects BAAT and BAL97,98 Absence of glycine and/or taurine conjugates.
Presence of cholic glucouronidates and/or sulfates and unconjugated cholic acid
↑ Unconjugated cholic and deoxycholic acid
Absence of chenodeoxycholic acid
Transient neonatal cholestasis
Fat-soluble-vitamin deficiencies

This table provides a summary of the enzymatic defects that occur in bile acid synthetic defects, along with the associated genes, urine and serum bile acid profiles and salient clinical features.1,30