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. Author manuscript; available in PMC: 2016 Sep 23.
Published in final edited form as: Neuron. 2015 Sep 23;87(6):1215–1233. doi: 10.1016/j.neuron.2015.09.016

Table 4.

Integrating Small De Novo Deletions in TADA Identified 65 ASD Genes

dnLoF Count FDR ≤ 0.01 0.01 < FDR ≤ 0.05 0.05 < FDR ≤ 0.1
≥2 ADNP, ANK2, ARID1B, ASH1L, CHD2, CHD8, CUL3, DSCAM, DYRK1A, GRIN2B, KATNAL2, KDM5B, KMT2C, NCKAP1, POGZ, SCN2A, SUV420H1, SYNGAP1, TBR1, TCF7L2, TNRC6B, WAC BCL11A, FOXP1, GIGYF1, ILF2, KDM6B, PHF2, RANBP17, SPAST, WDFY3 DIP2A, KMT2E
1 NRXN1, PTEN, SETD5, SHANK2, SHANK3, TRIP12 DNMT3A, GABRB3, KAT2B, MFRP, MYT1L, P2RX5 AKAP9, APH1A, CTTNBP2, ERBB2IP, ETFB, INTS6, IRF2BPL, MBD5, NAA15, NINL, OR52M1, PTK7, TRIO, USP45
0 – MIB1, SLC6A1, ZNF559 ACHE, CAPN12, NLGN3

Genes with a small de novo deletion are in bold. FDR, false discovery rate.