. 2017 Feb 6;18(3):451–464. doi: 10.1093/biostatistics/kxw055

Table 2.

Proportion of the top-ranking DE genes shared between analyses using the single-cell or summed counts. Top genes were defined as those with the smallest 20, 200, or 2000 Inline graphic -values in each comparison

Comparison	Top	DESeq2	voom	QL edgeR
	20	0.15	0.05	0.10
2i vs. serum	200	0.27	0.43	0.18
	2000	0.49	0.60	0.48
	20	0.25	0.20	0.10
a2i vs. serum	200	0.30	0.53	0.17
	2000	0.48	0.60	0.51