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. 2020 Mar 16;27(4):671–680.e2. doi: 10.1016/j.chom.2020.03.002

Table 4.

Dominant SARS-CoV B Cell Epitope Regions

SARS-CoV
SARS-CoV-2
Sequence Max RF Sequence Proteina Mapped Start–End Identity (%)
DAVDCSQNPLAELKCSVKSFEIDKGIYQTSNF 0.504 DAVDCALDPLSETKCTLKSFTVEKGIYQTSN S 287–317 69
VCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVIT 0.745 VCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVI S 524–598 80
GTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNN 0.709 GTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGS S 601–640 78
FSQILPDPLKPTKRSFIED 0.365 FSQILPDPSKPSKRSFIE S 802–819 89
FGAGAALQIPFAMQMAYRFNGIG 0.367 FGAGAALQIPFAMQMAYRFNGI S 888–909 100
MADNGTITVEELKQLLEQWNLVIG 0.460 MADSNGTITVEELKKLLEQWNLVI M 1–24 92
PLMESELVIGAVIIRGHLRMA 0.457 PLLESELVIGAVILRGHLRI M 132–151 90
PQGLPNNTASWFTALTQHGKEE 0.537 RPQGLPNNTASWFTALTQHGK N 42–62 95
NNAATVLQLPQGTTLPKGFYA 0.543 NNNAATVLQLPQGTTLPKGF N 153–172 95
KHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDD 0.82 NKHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADM N 355–401 90

S, surface glycoprotein; M, membrane protein; N, nucleocapsid phosphoprotein