TABLE 3.
Frequencies and phylogenetic affiliations of North Sea 16S rRNA clonesa
Phylogenetic group | No. (%) of clones | Next relative to cloneb | % 16S rRNA similarity |
---|---|---|---|
Bacteria | 54 (100) | ||
α-Proteobacteria | 4 (7.5) | ||
SAR116 clusterc | 3 | Unidentified alpha proteobacterium clone OM25d | 95.5 |
Roseobacter | 1 | Marine bacterium strain SFR1e | 97.9 |
γ-Proteobacteria | 49 (92.5) | ||
SAR86 clusterc | 44 (83) | ||
Group A | 17 | Unidentified gamma proteobacterium clone OM10d | 97.8–99.2 |
Group B | 27 | Unidentified gamma proteobacterium clone OCS5 AF001651d | 96.9–98.1 |
Thiomicrospira | 2 | Coxiella burnetiiD89795 | 88.4 |
Unknown affiliation | 2 | Clone of macroaggregate clone 44f | 99.2 |
Unknown affiliation | 1 | Unidentified gamma proteobacterium clone OM60d | 95.3 |
ɛ-Proteobacteria | 1 (2) | ||
Arcobacter | 1 | A. butzleri | 92.2 |