TABLE 9.
Archaeal Hsp40(DnaJ) amino acid sequences deduced from cloned genes: CXXCXGXG motif
| Motif no.a | Organism (reference)d | Amino acid position
|
Sequence qualityb | |
|---|---|---|---|---|
| First | Last | |||
| 1 | M. mazei S-6 (181) | 144 | 151 | C—C-G-G (4/4) |
| M. thermophila TM-1 (126) | 143 | 150 | C—C-G-G (4/4) | |
| M. thermoautotrophicum ΔH | 148 | 155 | C—C-G-Rc (3/4) | |
| H. cutirubrum (32) | 165 | 172 | C—C-G-G (4/4) | |
| 2 | M. mazei S-6 (181) | 161 | 168 | C—C-G-G (4/4) |
| M. thermophila TM-1 (126) | 160 | 167 | C—C-G-G (4/4) | |
| M. thermoautotrophicum ΔH | 165 | 172 | C—C-G-G (4/4) | |
| H. cutirubrum (32) | 182 | 189 | C—C-G-G (4/4) | |
| 3 | M. mazei S-6 (181) | 187 | 194 | C—C-G-G (4/4) |
| M. thermophila TM-1 (126) | 186 | 194 | C—C-G-G (4/4) | |
| M. thermoautotrophicum ΔH | 191 | 198 | C—C-G-G (4/4) | |
| H. cutirubrum (32) | 208 | 215 | C—C-G-G (4/4) | |
| 4 | M. mazei S-6 (181) | 201 | 208 | C—C-G-G (4/4) |
| M. thermophila TM-1 (126) | 200 | 207 | C—C-G-G (4/4) | |
| M. thermoautotrophicum ΔH | 205 | 212 | C—C-G-G (4/4) | |
| H. cutirubrum (32) | 222 | 229 | C—C-G-G (4/4) | |
a
For all the organisms, motifs 1 and 2, 2 and 3, and 3 and 4 are separated by 9, 18, and 6 amino acids, respectively.
b
-, one amino acid and —, two amino acids. Numbers in parentheses indicate the number of amino acids matching the four consensus residues.
c
Deviation from the norm, R (Arg) instead of G (Gly).
d
Accession numbers are the same as in Table 6.